Spov3_chr6.00759 (WLIM1, AtWLIM1)


Aliases : WLIM1, AtWLIM1

Description : LIM-type transcription factor


Gene families : OG0064917 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.00759
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_60


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004061 arylformamidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006569 tryptophan catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009063 amino acid catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009074 aromatic amino acid family catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042436 indole-containing compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070189 kynurenine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001781 Znf_LIM 11 65
IPR001781 Znf_LIM 109 164
No external refs found!