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Aliases : UMAMIT29
Description : not classified
Gene families : OG0000162 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr6.00620 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_134 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_S04.00075 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S04.00076 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S08.00057 | MNU1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04924 | bHLH13, bHLH013, JAM2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.00456 | MNU1 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.01526 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02672 | MNU1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01525 | MNU1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005811 | lipid droplet | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000477 | RT_dom | 370 | 440 |
| No external refs found! |