- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SIL1, HDAC6, ATHDA6, AXE1, RTS1, HDA6, RPD3B
Description : deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex. EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond. component *(HDA6) of histone deacetylation complex. histone deacetylase *(HDA8)
Gene families : OG0003106 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003106_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr6.00576 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_53 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006096 | glycolytic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0030014 | CCR4-NOT complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 42 | 345 |
| No external refs found! |