- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ORG2, bHLH38, BHLH038
Description : not classified
Gene families : OG0000452 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000452_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr6.00379 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_chr1.00605 | No alias | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01798 | TOL7 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03694 | BIR6 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03825 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03826 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04114 | MCTP4, FTIP4 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02206 | NTF2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.00378 | BG1 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005048 | signal sequence binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0010333 | terpene synthase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015074 | DNA integration | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0033218 | amide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042277 | peptide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045185 | maintenance of protein location | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0046923 | ER retention sequence binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051235 | maintenance of location | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051651 | maintenance of location in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| No external refs found! |