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  5. Spov3_chr6.00290

Spov3_chr6.00290 (SHY2, IAA3)


Aliases : SHY2, IAA3

Description : transcriptional repressor *(IAA/AUX)


Gene families : OG0000636 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.00290
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_5_67581.1 IAA4, ATAUX2-11 transcriptional repressor *(IAA/AUX) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004629 phospholipase C activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048364 root development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048731 system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 17 194
No external refs found!