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Aliases : QWRF8, AUG8
Description : RNA editing factor *(MEF29). component *(AUG8) of Augmin gamma-TuRC recruiting complex
Gene families : OG0001216 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001216_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra011219 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_126 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009308 | amine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030247 | polysaccharide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0048038 | quinone binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:2001070 | starch binding | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 1073 | 1099 |
| IPR002885 | Pentatricopeptide_rpt | 721 | 747 |
| IPR002885 | Pentatricopeptide_rpt | 1101 | 1129 |
| IPR002885 | Pentatricopeptide_rpt | 798 | 820 |
| IPR002885 | Pentatricopeptide_rpt | 1148 | 1174 |
| IPR002885 | Pentatricopeptide_rpt | 822 | 851 |
| IPR032867 | DYW_dom | 1326 | 1418 |
| IPR046849 | Eplus_motif | 1296 | 1318 |
| IPR007573 | QWRF | 295 | 583 |
| IPR002885 | Pentatricopeptide_rpt | 1000 | 1045 |
| IPR046848 | E_motif | 1228 | 1290 |
| No external refs found! |