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  5. Spov3_chr5.03956

Spov3_chr5.03956 (PPR2, RFL8, NG1, AtNG1)


Aliases : PPR2, RFL8, NG1, AtNG1

Description : not classified


Gene families : OG0000530 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.03956
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.00486 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 2 27
IPR002885 Pentatricopeptide_rpt 99 148
IPR002885 Pentatricopeptide_rpt 29 78
No external refs found!