Spov3_chr5.03713 (RAB1C, ATRABD2C, ATRAB1C)

Aliases : RAB1C, ATRABD2C, ATRAB1C

Description : D-class RAB GTPase

Gene families : OG0071822 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr5.03713
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_111

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006020	inositol metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006021	inositol biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	7	167

External Links

No external refs found!