Spov3_chr5.03561 (OSCA1.3)

Aliases : OSCA1.3

Description : not classified

Gene families : OG0001399 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr5.03561
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004519	endonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004521	RNA endonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004540	RNA nuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005681	spliceosomal complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010666	Znf_GRF	23	63

External Links

No external refs found!