Spov3_chr5.03492


Description : not classified


Gene families : OG0000012 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.03492

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0020.00005 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0085.00005 TAC1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0101.00005 RER1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02224 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02225 CRD1, ACSF, CHL27 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03723 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03809 ftsh9 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02738 LBD10 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04955 AT2 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01184 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01196 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01833 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02015 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02362 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02498 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02861 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02882 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03395 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02853 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03493 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03867 CIPK4, SnRK3.3 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04057 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04058 FLA21 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04149 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01825 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02278 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02888 ATCSLC06,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006282 regulation of DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0080134 regulation of response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0080135 regulation of cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!