Spov3_chr5.03457 (SPT5L, KTF1)


Aliases : SPT5L, KTF1

Description : not classified


Gene families : OG0000064 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.03457
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0006.00006 ATEXO70D2, EXO70D2 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0011.00034 emb1579, RSA1 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0011.00056 No alias not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00103 VAL3 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01307 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02248 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02630 GAD5 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02550 LOS1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02703 SLAH3 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02953 APO4 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01663 ILL6 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02294 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01359 AHL24 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02108 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02338 TTL3, VIT not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02387 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!