Aliases : RPT2a
Description : regulatory component *(RPT2) of 26S proteasome
Gene families : OG0001628 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001628_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra011079 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_127 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Lsat_1_v5_gn_5_179060.1 | RPT2a | regulatory component *(RPT2) of 26S proteasome | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004180 | carboxypeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005839 | proteasome core complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006397 | mRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006508 | proteolysis | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006631 | fatty acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008238 | exopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008380 | RNA splicing | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016071 | mRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043248 | proteasome assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0070403 | NAD+ binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1902494 | catalytic complex | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |