1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra011054

Bra011054


Description : not classified


Gene families : OG0026255 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra011054
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_286


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Brassica rapa GO terms from Neighborhoods
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004126 cytidine deaminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006216 cytidine catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009119 ribonucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009164 nucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009415 response to water IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009972 cytidine deamination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042454 ribonucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046087 cytidine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 114 144
IPR002885 Pentatricopeptide_rpt 288 312
IPR002885 Pentatricopeptide_rpt 151 179
No external refs found!