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  5. Bra010992

Bra010992 (OTP90)


Aliases : OTP90

Description : RNA editing factor *(OTP90)


Gene families : OG0031411 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra010992
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_140


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000160 phosphorelay signal transduction system IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 472 565
IPR046848 E_motif 374 436
IPR002885 Pentatricopeptide_rpt 331 354
IPR002885 Pentatricopeptide_rpt 127 157
IPR002885 Pentatricopeptide_rpt 1 21
IPR002885 Pentatricopeptide_rpt 159 188
IPR002885 Pentatricopeptide_rpt 231 253
IPR002885 Pentatricopeptide_rpt 99 125
IPR002885 Pentatricopeptide_rpt 257 304
IPR002885 Pentatricopeptide_rpt 26 72
No external refs found!