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  5. Bra010963

Bra010963


Description : E3 ubiquitin ligase


Gene families : OG0007940 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra010963
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_154


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004806 triglyceride lipase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022839 monoatomic ion gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!