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  5. Spov3_chr5.01687

Spov3_chr5.01687 (ESD4, ATESD4)


Aliases : ESD4, ATESD4

Description : protease *(ELS)


Gene families : OG0008888 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.01687
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_162


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000176 nuclear exosome (RNase complex) IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006376 mRNA splice site recognition IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032259 methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042274 ribosomal small subunit biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043545 molybdopterin cofactor metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051189 prosthetic group metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 316 497
No external refs found!