Aliases : PMH2, ATRH53
Description : group-II intron splicing RNA helicase *(PMH)
Gene families : OG0020219 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr5.00844 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_2 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0001510 | RNA methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003712 | transcription coregulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003714 | transcription corepressor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003729 | mRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003824 | catalytic activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004386 | helicase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004506 | squalene monooxygenase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004527 | exonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006351 | DNA-templated transcription | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006364 | rRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006396 | RNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006397 | mRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0008152 | metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009987 | cellular process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0016070 | RNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0016071 | mRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0016072 | rRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016462 | pyrophosphatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016740 | transferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016887 | ATP hydrolysis activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0030684 | preribosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0031072 | heat shock protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0031123 | RNA 3'-end processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0031167 | rRNA methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0032040 | small-subunit processome | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0032774 | RNA biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0032991 | protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034470 | ncRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034660 | ncRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0035145 | exon-exon junction complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0043022 | ribosome binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043414 | macromolecule methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0044237 | cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0045116 | protein neddylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0046483 | heterocycle metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0051082 | unfolded protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0070037 | rRNA (pseudouridine) methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0070475 | rRNA base methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0090730 | Las1 complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0097747 | RNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140657 | ATP-dependent activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:1902555 | endoribonuclease complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:1902911 | protein kinase complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:1905348 | endonuclease complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:1905354 | exoribonuclease complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
No external refs found! |