Spov3_chr5.00816 (ATMLH1, MLH1)


Aliases : ATMLH1, MLH1

Description : component *(MLH1) of MutLy endonuclease heterodimer. component *(MLH1) of MLH1-PMS1 heterodimer


Gene families : OG0003257 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.00816
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_44


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 113 224
IPR013507 DNA_mismatch_S5_2-like 498 619
IPR032189 Mlh1_C 716 1002
No external refs found!