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Aliases : LHCB1.3, AB140, CAB140, CAB1
Description : component *(LHCb1/2/3) of LHC-II complex
Gene families : OG0000370 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000370_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra010807 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra021909 | DEG11, LHCB1.4, LHB1B1 | component *(LHCb1/2/3) of LHC-II complex | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Bra022976 | DEG11, LHCB1.4, LHB1B1 | component *(LHCb1/2/3) of LHC-II complex | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006260 | DNA replication | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009538 | photosystem I reaction center | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0017038 | protein import | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 66 | 233 |
| No external refs found! |