Spov3_chr5.00480

Description : not classified

Gene families : OG0020301 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr5.00480
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamine synthetase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0009538	photosystem I reaction center	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016851	magnesium chelatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	130	271

External Links

No external refs found!

Spov3_chr5.00480

Expression Profile

Co-expression Networks

Functional Annotation