Spov3_chr4.04602 (PME1, ATPME1)

Aliases : PME1, ATPME1

Description : EC_3.1 hydrolase acting on ester bond. pectin methylesterase

Gene families : OG0020188 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.04602
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_973

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0001932	regulation of protein phosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004565	beta-galactosidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0009341	beta-galactosidase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015925	galactosidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019842	vitamin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019901	protein kinase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030170	pyridoxal phosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042325	regulation of phosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043549	regulation of kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045859	regulation of protein kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051338	regulation of transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070279	vitamin B6 binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	276	568
IPR006501	Pectinesterase_inhib_dom	73	216

External Links

No external refs found!

Spov3_chr4.04602 (PME1, ATPME1)

Expression Profile

Co-expression Networks

Functional Annotation