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Description : not classified
Gene families : OG0001400 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001400_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr4.04019 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_chr4.01664 | APK2A, PBL2, Kin1 | EC_2.7 transferase transferring phosphorus-containing group | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.04012 | APK2A, PBL2, Kin1 | EC_2.7 transferase transferring phosphorus-containing group | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007034 | vacuolar transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140110 | transcription regulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 357 | 385 |
| No external refs found! |