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  5. Spov3_chr4.03458

Spov3_chr4.03458 (PGP5, ABCB5)


Aliases : PGP5, ABCB5

Description : not classified


Gene families : OG0000724 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.03458
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr5.04332 SMU2 component *(SMU2) of SMU splicing factor complex 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 369 488
IPR026960 RVT-Znf 175 260
No external refs found!