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  5. Spov3_chr4.03383

Spov3_chr4.03383 (AHP1)


Aliases : AHP1

Description : not classified


Gene families : OG0010167 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.03383
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr3.00701 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 997 1054
IPR000477 RT_dom 604 761
IPR045358 Ty3_capsid 89 219
IPR041577 RT_RNaseH_2 825 873
IPR023780 Chromo_domain 1374 1421
No external refs found!