Spov3_chr4.03342 (PAT2, WAT1, AP-3 beta)

Aliases : PAT2, WAT1, AP-3 beta

Description : large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex

Gene families : OG0073642 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.03342
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_955

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	39	663
IPR029390	AP3B_C	877	935

External Links

No external refs found!