Spov3_chr4.03150 (MER3, RCK)

Aliases : MER3, RCK

Description : DNA helicase *(RCK/MER3)

Gene families : OG0072988 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.03150
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_26

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	210	351
IPR011545	DEAD/DEAH_box_helicase_dom	1	173
IPR004179	Sec63-dom	467	711

External Links

No external refs found!