Bra010550


Description : component *(uL2) of large ribosomal-subunit (LSU) proteome


Gene families : OG0000375 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra010550
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Bra017749 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra039911 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_4380.1 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_94880.1 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Mp7g01860.1 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Mp7g08730.1 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00337 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006479 protein methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006480 N-terminal protein amino acid methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032259 methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022666 Ribosomal_uL2_RNA-bd_dom 13 89
IPR022669 Ribosomal_uL2_C 98 225
No external refs found!