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  5. Spov3_chr4.03035

Spov3_chr4.03035


Description : not classified


Gene families : OG0001827 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.03035
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.02671 XIK, XI-17, ATXIK, XI-K not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03116 BZO2H4, BZIP25, ATBZIP25 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 164 267
IPR008906 HATC_C_dom 315 397
No external refs found!