Spov3_chr4.02908 (EMB1144)

Aliases : EMB1144

Description : EC_4.2 carbon-oxygen lyase. chorismate synthase

Gene families : OG0004008 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.02908
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_119

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_2_114381.1	EMB1144	chorismate synthase. EC_4.2 carbon-oxygen lyase	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004107	chorismate synthase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004363	glutathione synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004594	pantothenate kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006749	glutathione metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006750	glutathione biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006862	nucleotide transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009165	nucleotide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015297	antiporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016881	acid-amino acid ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018208	peptidyl-proline modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019184	nonribosomal peptide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019842	vitamin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030170	pyridoxal phosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070279	vitamin B6 binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1904091	non-ribosomal peptide synthetase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000453	Chorismate_synth	61	408

External Links

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Spov3_chr4.02908 (EMB1144)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation