Spov3_chr4.02505


Description : not classified


Gene families : OG0000151 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000151_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.02505
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00089 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0004.00020 AtGH9B18, CEL6, GH9B18 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02472 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04184 CHR25, ATRAD54, RAD54 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01609 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02077 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.05023 ATMSRB6, MSRB6 not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01196 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02588 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03540 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 564 667
No external refs found!