Spov3_chr4.02134 (TAF10, STG1, TAFII15)

Aliases : TAF10, STG1, TAFII15

Description : component *(TAF10) of SAGA transcription co-activator complex

Gene families : OG0073872 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.02134
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_111

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003923	TFIID_30kDa	30	79

External Links

No external refs found!

Spov3_chr4.02134 (TAF10, STG1, TAFII15)

Expression Profile

Co-expression Networks

Functional Annotation