Spov3_chr4.01979 (SCO4)


Aliases : SCO4

Description : not classified


Gene families : OG0074444 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01979
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_44


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005544 calcium-dependent phospholipid binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005491 ENT_dom 313 364
IPR008395 Agenet-like_dom 15 67
No external refs found!