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  5. Spov3_chr4.01905

Spov3_chr4.01905 (ATHEXP ALPHA 1.1,...)


Aliases : ATHEXP ALPHA 1.1, ATEXPA10, AT-EXP10, EXPA10, ATEXP10, EXP10

Description : alpha-class expansin


Gene families : OG0003548 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01905
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_12


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005484 SNAP receptor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 148
IPR007117 Expansin_CBD 159 236
No external refs found!