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  5. Spov3_chr4.01867

Spov3_chr4.01867 (SUA)


Aliases : SUA

Description : not classified


Gene families : OG0000072 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01867
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0017.00005 UPL2 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0018.00039 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0020.00026 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04054 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04087 NAC102, ANAC102 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00351 STK, AGL11 MADS/AGL-type transcription factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00621 NAC007, VND4,... not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01866 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02025 CHR17 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02027 CHR17 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02817 NAC007, VND4,... not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03442 NAC102, ANAC102 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009415 response to water IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000477 RT_dom 447 510
IPR000477 RT_dom 541 603
No external refs found!