Spov3_chr4.01730 (RDR1, AtRDR1, ATRDRP1)


Aliases : RDR1, AtRDR1, ATRDRP1

Description : not classified


Gene families : OG0007740 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01730
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_51


Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022839 monoatomic ion gated channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046903 secretion IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 369 943
No external refs found!