Spov3_chr4.01522 (RH8, ATRH8)

Aliases : RH8, ATRH8

Description : not classified

Gene families : OG0000443 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.01522
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_19

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr1.02443	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8)	0.08	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02006	RH8, ATRH8	DDX6-type mRNA helicase *(RH12/RH8)	0.08	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006848	pyruvate transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901475	pyruvate transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	37	149
IPR001650	Helicase_C	170	231

External Links

No external refs found!