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  5. Spov3_chr4.01151

Spov3_chr4.01151


Description : not classified


Gene families : OG0000128 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01151
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.01067 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00954 NTP4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00414 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01215 AtHMGB15, HMGBD15 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 1782 1845
IPR002156 RNaseH_domain 1596 1687
IPR025558 DUF4283 100 239
IPR000477 RT_dom 1085 1342
No external refs found!