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  5. Spov3_chr4.01016

Spov3_chr4.01016 (PAP27, ATPAP27)


Aliases : PAP27, ATPAP27

Description : protein involved in PS-II assembly *(LTO1). thiol-disulfide oxidoreductase *(LTO1)


Gene families : OG0010128 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01016
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_125


Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006066 alcohol metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006772 thiamine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009228 thiamine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034308 primary alcohol metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034309 primary alcohol biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042723 thiamine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046165 alcohol biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR040974 Fn3_PAP 375 477
IPR025733 Purple_acid_PPase_C_dom 844 903
IPR004843 Calcineurin-like_PHP_ApaH 604 819
IPR015914 Purple_acid_Pase_N 489 592
IPR012932 VKOR 82 212
No external refs found!