Spov3_chr4.00880 (RGTA1, ATRGTA1)

Aliases : RGTA1, ATRGTA1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group. subunit alpha of RAB-GTPase geranylgeranyltransferase (RGT) complex

Gene families : OG0000129 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.00880
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_138

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004659	prenyltransferase activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008318	protein prenyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0018342	protein prenylation	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097354	prenylation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002088	Prenyl_trans_a	120	146
IPR002088	Prenyl_trans_a	155	185
IPR002088	Prenyl_trans_a	43	71
IPR002088	Prenyl_trans_a	84	113
IPR002088	Prenyl_trans_a	201	230

External Links

No external refs found!

Spov3_chr4.00880 (RGTA1, ATRGTA1)

Expression Profile

Co-expression Networks

Functional Annotation