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  5. Spov3_chr4.00871

Spov3_chr4.00871 (CSTF77, ATCSTF77)


Aliases : CSTF77, ATCSTF77

Description : component *(CstF77/Rna14) of Cleavage Stimulatory Factor (CstF) complex


Gene families : OG0074552 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00871
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_160


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003919 FMN adenylyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0017119 Golgi transport complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008847 Suf 337 630
No external refs found!