Spov3_chr4.00555

Description : not classified

Gene families : OG0000012 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.00555
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_124

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006282	regulation of DNA repair	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010167	response to nitrate	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015706	nitrate transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0017148	negative regulation of translation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030198	extracellular matrix organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030597	RNA glycosylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030598	rRNA N-glycosylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034248	regulation of amide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034249	negative regulation of amide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043062	extracellular structure organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080134	regulation of response to stress	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902025	nitrate import	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	819	888

External Links

No external refs found!

Spov3_chr4.00555

Expression Profile

Co-expression Networks

Functional Annotation