1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr4.00475

Spov3_chr4.00475 (CCT, CRP, MED12)


Aliases : CCT, CRP, MED12

Description : not classified


Gene families : OG0000126 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00475
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0012.00018 SUN2, ATSUN2 not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0012.00065 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0012.00066 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0085.00007 GTE4 substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03364 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03755 CYP76C7 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03756 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04540 No alias not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03781 MEE53 not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02186 No alias not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009415 response to water IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025452 DUF4218 415 468
IPR004242 Transposase_21 19 231
No external refs found!