Spov3_chr4.00397

Description : component *(NRPC4) of RNA polymerase III complex

Gene families : OG0003801 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003801_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.00397
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_84

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
CC	GO:0030880	RNA polymerase complex	IEA	Interproscan
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008079	translation termination factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0040008	regulation of growth	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045927	positive regulation of growth	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	2	22
IPR001611	Leu-rich_rpt	50	73
IPR005574	Rpb4/RPC9	161	214

External Links

No external refs found!

Spov3_chr4.00397

Expression Profile

Co-expression Networks

Functional Annotation