Bra010221 (ATDBR1, DBR1)

Aliases : ATDBR1, DBR1

Description : RNA splicing intron-lariat-RNA degrading enzyme *(DBR1)

Gene families : OG0007108 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra010221
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_90

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008374	O-acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007708	DBR1_C	422	543
IPR004843	Calcineurin-like_PHP_ApaH	189	409

External Links

No external refs found!

Bra010221 (ATDBR1, DBR1)

Expression Profile

Co-expression Networks

Functional Annotation