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  5. Spov3_chr3.04717

Spov3_chr3.04717 (STP1, ATSTP1)


Aliases : STP1, ATSTP1

Description : monosaccharide transporter *(STP)


Gene families : OG0000402 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.04717
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_847

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.00446 STP1, ATSTP1 monosaccharide transporter *(STP) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.00283 STP1, ATSTP1 monosaccharide transporter *(STP) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.00284 STP1, ATSTP1 monosaccharide transporter *(STP) 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01267 STP12 monosaccharide transporter *(STP) 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 28 490
No external refs found!