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  5. Spov3_chr3.04708

Spov3_chr3.04708


Description : not classified


Gene families : OG0066494 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.04708
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_162


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006376 mRNA splice site recognition IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 259 315
IPR002885 Pentatricopeptide_rpt 652 689
IPR002885 Pentatricopeptide_rpt 475 523
IPR002885 Pentatricopeptide_rpt 724 770
IPR002885 Pentatricopeptide_rpt 791 837
IPR002885 Pentatricopeptide_rpt 582 628
IPR002885 Pentatricopeptide_rpt 337 384
IPR002885 Pentatricopeptide_rpt 690 719
IPR002885 Pentatricopeptide_rpt 549 572
IPR002885 Pentatricopeptide_rpt 412 438
IPR002885 Pentatricopeptide_rpt 444 473
No external refs found!