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  5. Spov3_chr3.04264

Spov3_chr3.04264 (DEL1, E2FE, E2L3)


Aliases : DEL1, E2FE, E2L3

Description : FRS/FRF-type transcription factor


Gene families : OG0000078 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.04264
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Spov3_S02.00027 ELI3-2, ATCAD8,... not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S04.00077 AtNPC4, NPC4 FRS/FRF-type transcription factor 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02428 FRS5 FRS/FRF-type transcription factor 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04442 CPK22 FRS/FRF-type transcription factor 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02152 CPK22 FRS/FRF-type transcription factor 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02349 AGC1-12 FRS/FRF-type transcription factor 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01448 FHY3, CPD45 FRS/FRF-type transcription factor 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.04265 ELI3-2, ATCAD8,... not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01645 FRS1 FRS/FRF-type transcription factor 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02078 FRS2 FRS/FRF-type transcription factor 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03451 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 167 249
No external refs found!