Spov3_chr3.03960 (CRSH, ATCRSH)

Aliases : CRSH, ATCRSH

Description : ppGpp synthetase *(CRSH)

Gene families : OG0067230 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.03960
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_148

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005516	calmodulin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005548	phospholipid transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008066	glutamate receptor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015914	phospholipid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016161	beta-amylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016459	myosin complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022835	transmitter-gated channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030259	lipid glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030594	neurotransmitter receptor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0038023	signaling receptor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0060089	molecular transducer activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	308	431
IPR002048	EF_hand_dom	472	525

External Links

No external refs found!

Spov3_chr3.03960 (CRSH, ATCRSH)

Expression Profile

Co-expression Networks

Functional Annotation