Bra001004 (IRP6, RH14, DRH1, ATDRH1)

Aliases : IRP6, RH14, DRH1, ATDRH1

Description : not classified

Gene families : OG0004273 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004273_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra001004
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_278

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003883	CTP synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005516	calmodulin binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016559	peroxisome fission	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043531	ADP binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048285	organelle fission	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070403	NAD+ binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001202	WW_dom	18	48
IPR011545	DEAD/DEAH_box_helicase_dom	180	349
IPR001650	Helicase_C	387	495

External Links

No external refs found!