Spov3_chr3.03449 (AtABCA1, ABCA1)

Aliases : AtABCA1, ABCA1

Description : subfamily ABCA transporter

Gene families : OG0066478 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.03449
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_142

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004470	malic enzyme activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016615	malate dehydrogenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1445	1587
IPR003439	ABC_transporter-like_ATP-bd	538	681

External Links

No external refs found!

Spov3_chr3.03449 (AtABCA1, ABCA1)

Expression Profile

Co-expression Networks

Functional Annotation